GENtle/Protein

thumb|The protein module. In this module, amino acid sequences (peptides/proteins) can be viewed, edited and annotated. It uses a sequence map as main display, and a multi-purpose overview display at the top. Toolbar Several functions and display options can be invoked in the tool bar: Enter sequence Open sequence Save sequence Print sequence Undo Cut Copy Paste Plot (shows a plot within the sequence map) Horizontal mode Function display The smaller display on the top can show several types of information: DataShows some basic data that has been calculated from the sequenceDescriptionShows the sequence descriptionSchemeShows a ../DNA map/-like layout of the whole proteinAA weightShows a plot of the molecular weight of the individual amino acidsAA isoelectric pointShows a plot of the isoelectric point of the individual amino acidsHydrophobicityShows a plot of the local hydrophobicity of the amino acids nearbyChou-Fasman plotShows a detailed Chou-Fasman-plot Special menus Edit/Photometer analysisInvokes the respective calculatorEdit/'Backtranslate' DNAAttempts to generate the DNA sequence which codes for this amino acid sequence, using the full range of IUPAC base lettersEdit/Proteolysis assistantInvokes the proteolysis assistant