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411 REFERENCE · Wikibooks

GENtle/Command line options

Reference material by Wikibooks contributors. This retains its source identity and is not 411 news reporting.

GENtle can be called from the command line/shell/DOS box. You can automatically import and open files by adding them to the command line: > GENtle my_sequence.gb my_sequencing.ab1 New parameters as of version 1.8.6: --view-sequencing-start=XWhen auto-opening an alignment, show only the sequence from position X on (first position=1) --view-sequencing-end=XWhen auto-opening an alignment, show only the sequence up to position X on (first position=1) --view-sequencing-reverse-complementWhen auto-opening an alignment, show the reverse complement sequence --no-splash-screenDo not show splash screen --no-tipsDo not show tips